# Cumulative Percent Decay Curve Generator

## Documentation for package ‘cuperdec’ version 1.1.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

adaptive_burnin_filter | Calculate adaptive burn-in retain/discard list
calculate_curve | Calculate cumulative decay percent curve
cuperdec_database_ex | Example isolation source database input for cuperdec
cuperdec_metadata_ex | Example metadata file input for cuperdec
cuperdec_taxatable_ex | Example taxon table input for cuperdec
hard_burnin_filter | Calculate hard burn-in retain/discard list
load_database | Load database
load_map | Load metadata table
load_taxa_table | Load OTU table
plot_cuperdec | Plot cumulative percent decay curves
simple_filter | Apply simple percentage filter